Bibliography

• [1] M. Anitescu and F. A. Potra (2002) A time-stepping method for stiff multibody dynamics with contact and friction. International Journal for Numerical Methods in Engineering 55 (7), pp. 753–784. Cited by: §8.9.4.
• [2] E. M. Arruda and M. C. Boyce (1993) A three-dimensional constitutive model for the large stretch behavior of rubber elastic materials. Journal of the Mechanics and Physics of Solids 41 (2), pp. 389–412. Cited by: §6.10.2.8.
• [3] Y. Bei and B. J. Fregly (2004) Multibody dynamic simulation of knee contact mechanics. Medical engineering & physics 26 (9), pp. 777–789. Cited by: §8.7.3.
• [4] L. Blankevoort and R. Huiskes (1991) Ligament-bone interaction in a three-dimensional model of the knee. J. Biomech. Eng. 113 (3), pp. 263–269. Cited by: §4.5.5.3.
• [5] S. S. Blemker and S. L. Delp (2005) Three-dimensional representation of complex muscle architectures and geometries. Annals of biomedical engineering 33 (5), pp. 661–673. Cited by: §4.5.1.5, §6.10.3.2, §6.10.3.3, §6.9.3.
• [6] J. Bonet and R. D. Wood (2000) Nonlinear continuum mechanics for finite element analysis. Cambridge University Press. Cited by: §6.1.
• [7] S. L. Delp, F. C. Anderson, A. S. Arnold, P. Loan, A. Habib, C. T. John, E. Guendelman and D. G. Thelen (2007) OpenSim: open-source software to create and analyze dynamic simulations of movement. IEEE T Bio-Med Eng 54 (11), pp. 1940–1950. Cited by: §1.2, §10.1, §10.2.9, §4.5.4.1, §4.5.4.2, §4.5.5.3.
• [8] L. Kavan, S. Collins, J. Žára and C. O’Sullivan (2008) Geometric skinning with approximate dual quaternion blending. ACM Transactions on Graphics (TOG) 27 (4), pp. 1–23. Cited by: item DUAL_QUATERNION_LINEAR, item DUAL_QUATERNION_ITERATIVE.
• [9] C. Lacoursière (2007) Ghosts and machines: regularized variational methods for interactive simulations of multibodies with dry frictional contacts. Ph.D. Thesis, Umeå University, Department of Computing Science. Cited by: §3.3.8.
• [10] C. Lacoursière (2007) Ghosts and machines: regularized variational methods for interactive simulations of multibodies with dry frictional contacts. Ph.D. Thesis, Datavetenskap, UmeÂ, Computer Science Dept., Umea University, Sweden. Cited by: §8.9.4.
• [11] J. E. Lloyd, I. Stavness and S. Fels (2012) ArtiSynth: a fast interactive biomechanical modeling toolkit combining multibody and finite element simulation. In Soft tissue biomechanical modeling for computer assisted surgery, pp. 355–394. Cited by: §1.2, §10.1.3, §10.1.3, §3.3.2.
• [12] S. Maas, B. J Ellis, G. A Ateshian and J. Weiss (2012-01) FEBio: finite elements for biomechanics. Journal of biomechanical engineering 134, pp. 011005. External Links: Document Cited by: §6.1.2.3.
• [13] S. Maas, D. Rawlins, J. Weiss and G. Ateshian FEBio theory manual. Note: https://help.febio.org/FEBio/FEBio_tm_2_7 Cited by: §6.1.2.3, §6.10.1.
• [14] M. Millard and S. Delp (2012) A computationally efficient muscle model. In Summer Bioengineering Conference, pp. 1055–1056. Cited by: §4.5.6.
• [15] M. Millard, T. Uchida, A. Seth and S. L. Delp (2013) Flexing computational muscle: modeling and simulation of musculotendon dynamics. Journal of biomechanical engineering 135 (2). Cited by: §4.5.4.1.
• [16] M. Müller and M. H. Gross (2004) Interactive virtual materials.. In Graphics interface, Vol. 2004, pp. 239–246. Cited by: §6.1.3, §6.10.1, §6.10.1.
• [17] M. Nesme, P. G. Kry, L. Jeřábková and F. Faure (2009) Preserving topology and elasticity for embedded deformable models. In ACM Transactions on Graphics (TOG), Vol. 28, pp. 52. Cited by: Chapter 11.
• [18] W. Ngan and J. Lloyd (2008-02) Efficient deformable body simulation using stiffness-warped nonlinear finite elements. In Symposium on Interactive 3D Graphics and Games (i3D), pp. . Note: poster Cited by: §6.1.3, §6.10.1, §6.10.1.
• [19] C. Peck, G. Langenbach and A. Hannam (2000) Dynamic simulation of muscle and articular properties during human wide jaw opening. Archives of Oral Biology 45 (11), pp. 963–982. Cited by: §4.5.1.4.
• [20] F. A. Potra, M. Anitescu, B. Gavrea and J. Trinkle (2006) A linearly implicit trapezoidal method for integrating stiff multibody dynamics with contact, joints, and friction. International Journal for Numerical Methods in Engineering 66 (7), pp. 1079–1124. Cited by: §8.9.4.
• [21] M. Servin, C. Lacoursiere and N. Melin (2006) Interactive simulation of elastic deformable materials. In Proceedings of SIGRAD Conference 2006 in Skövde, Sweden, pp. 22–32. Cited by: §3.3.8.
• [22] M. A. Sherman, A. Seth and S. L. Delp (2011) Simbody: multibody dynamics for biomedical research. Procedia Iutam 2, pp. 241–261. Cited by: §8.7.3.
• [23] C. R. Smith, R. L. Lenhart, J. Kaiser, M. F. Vignos and D. G. Thelen (2016) Influence of ligament properties on tibiofemoral mechanics in walking. The journal of knee surgery, pp. 099–106. Cited by: §4.5.5.3.
• [24] I. Stavness, C. A. Sánchez, J. Lloyd, A. w. Ho, J. Wang, S. Fels and D. Huang (2014) Unified skinning of rigid and deformable models for anatomical simulati on s. In SIGGRAPH Asia 2014 Technical Briefs, pp. 9. Cited by: Figure 11.1, Chapter 11.
• [25] G. Taubin (1995) Curve and surface smoothing without shrinkage. In Computer Vision, 1995. Proceedings., Fifth International Conference on, pp. 852–857. Cited by: §9.3.
• [26] D. G. Thelen (2003) Adjustment of muscle mechanics model parameters to simulate dynamic contractions in older adults. J. Biomech. Eng. 125 (1), pp. 70–77. Cited by: §4.5.4.2, §4.5.4.2, §4.5.4.2, §4.5.4.2.
• [27] D. Veronda and R. Westmann (1970) Mechanical characterization of skin-finite deformations. Journal of biomechanics 3 (1), pp. 111–124. Cited by: §6.10.2.9.