maspack.image.nifti

Class MappedPixelGenerator

java.lang.Object

maspack.properties.CompositePropertyBase

maspack.image.nifti.NiftiPixelGenerator

maspack.image.nifti.MappedPixelGenerator

All Implemented Interfaces:

java.lang.Cloneable, CompositeProperty, HasProperties, Clonable, Scannable, Versioned

public class MappedPixelGenerator
extends NiftiPixelGenerator

Nested Class Summary

Nested classes/interfaces inherited from class maspack.image.nifti.NiftiPixelGenerator

NiftiPixelGenerator.Format

Constructor Summary

Constructors

Constructor and Description
MappedPixelGenerator()
MappedPixelGenerator(maspack.image.nifti.MappedPixelGenerator.VoxelInput red, int redVidx, maspack.image.nifti.MappedPixelGenerator.VoxelInput green, int greenVidx, maspack.image.nifti.MappedPixelGenerator.VoxelInput blue, int blueVidx)

Method Summary

Modifier and Type	Method and Description
MappedPixelGenerator	clone() Returns a clone of this composite property.
void	detectDefault(NiftiDataBuffer buff)
void	detectDefault(NiftiImage image)
PropertyList	getAllPropertyInfo() Returns a list giving static information about all properties exported by this object.
maspack.image.nifti.MappedPixelGenerator.VoxelInput	getBlueInput()
int	getBlueValueIndex()
NiftiPixelGenerator.Format	getFormat()
maspack.image.nifti.MappedPixelGenerator.VoxelInput	getGreenInput()
int	getGreenValueIndex()
void	getPixels(NiftiDataBuffer buff, int i, int di, int ni, int j, int dj, int nj, int k, int dk, int nk, int t, int scanline, int pageline, java.nio.ByteBuffer rgb) Fills a byte buffer with pixels
maspack.image.nifti.MappedPixelGenerator.VoxelInput	getRedInput()
int	getRedValueIndex()
int	getVersion()
double	getWindowCenter()
double	getWindowWidth()
void	setBlueInput(maspack.image.nifti.MappedPixelGenerator.VoxelInput input)
void	setBlueValueIndex(int idx)
void	setGreenInput(maspack.image.nifti.MappedPixelGenerator.VoxelInput input)
void	setGreenValueIndex(int idx)
void	setRedInput(maspack.image.nifti.MappedPixelGenerator.VoxelInput input)
void	setRedValueIndex(int idx)
void	setWindow(double center, double width)
void	setWindowCenter(double c)
void	setWindowLimits(double min, double max)
void	setWindowToRange(byte[] buff)
void	setWindowToRange(double[] buff)
void	setWindowToRange(float[] buff)
void	setWindowToRange(int[] buff)
void	setWindowToRange(long[] buff)
void	setWindowToRange(short[] buff)
void	setWindowToUnsignedRange(byte[] buff)
void	setWindowToUnsignedRange(int[] buff)
void	setWindowToUnsignedRange(long[] buff)
void	setWindowToUnsignedRange(short[] buff)
void	setWindowWidth(double w)

Methods inherited from class maspack.image.nifti.NiftiPixelGenerator

getSubClasses, registerSubclass

Methods inherited from class maspack.properties.CompositePropertyBase

getProperty, getPropertyHost, getPropertyInfo, hasProperty, isWritable, scan, setPropertyHost, setPropertyInfo, write, writeItems

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

MappedPixelGenerator

public MappedPixelGenerator()

MappedPixelGenerator

public MappedPixelGenerator(maspack.image.nifti.MappedPixelGenerator.VoxelInput red,
                            int redVidx,
                            maspack.image.nifti.MappedPixelGenerator.VoxelInput green,
                            int greenVidx,
                            maspack.image.nifti.MappedPixelGenerator.VoxelInput blue,
                            int blueVidx)

Method Detail

getAllPropertyInfo

public PropertyList getAllPropertyInfo()

Description copied from interface: HasProperties

Returns a list giving static information about all properties exported by this object.

Specified by:

getAllPropertyInfo in interface HasProperties

Overrides:

getAllPropertyInfo in class CompositePropertyBase

Returns:

static information for all exported properties

getVersion

public int getVersion()

setRedInput

public void setRedInput(maspack.image.nifti.MappedPixelGenerator.VoxelInput input)

getRedInput

public maspack.image.nifti.MappedPixelGenerator.VoxelInput getRedInput()

setRedValueIndex

public void setRedValueIndex(int idx)

getRedValueIndex

public int getRedValueIndex()

setGreenInput

public void setGreenInput(maspack.image.nifti.MappedPixelGenerator.VoxelInput input)

getGreenInput

public maspack.image.nifti.MappedPixelGenerator.VoxelInput getGreenInput()

setGreenValueIndex

public void setGreenValueIndex(int idx)

getGreenValueIndex

public int getGreenValueIndex()

setBlueInput

public void setBlueInput(maspack.image.nifti.MappedPixelGenerator.VoxelInput input)

getBlueInput

public maspack.image.nifti.MappedPixelGenerator.VoxelInput getBlueInput()

setBlueValueIndex

public void setBlueValueIndex(int idx)

getBlueValueIndex

public int getBlueValueIndex()

getWindowCenter

public double getWindowCenter()

setWindowCenter

public void setWindowCenter(double c)

getWindowWidth

public double getWindowWidth()

setWindowWidth

public void setWindowWidth(double w)

setWindow

public void setWindow(double center,
                      double width)

setWindowLimits

public void setWindowLimits(double min,
                            double max)

setWindowToRange

public void setWindowToRange(double[] buff)

setWindowToRange

public void setWindowToRange(float[] buff)

setWindowToRange

public void setWindowToRange(byte[] buff)

setWindowToRange

public void setWindowToRange(short[] buff)

setWindowToRange

public void setWindowToRange(int[] buff)

setWindowToRange

public void setWindowToRange(long[] buff)

setWindowToUnsignedRange

public void setWindowToUnsignedRange(byte[] buff)

setWindowToUnsignedRange

public void setWindowToUnsignedRange(short[] buff)

setWindowToUnsignedRange

public void setWindowToUnsignedRange(int[] buff)

setWindowToUnsignedRange

public void setWindowToUnsignedRange(long[] buff)

detectDefault

public void detectDefault(NiftiImage image)

detectDefault

public void detectDefault(NiftiDataBuffer buff)

getPixels

public void getPixels(NiftiDataBuffer buff,
                      int i,
                      int di,
                      int ni,
                      int j,
                      int dj,
                      int nj,
                      int k,
                      int dk,
                      int nk,
                      int t,
                      int scanline,
                      int pageline,
                      java.nio.ByteBuffer rgb)

Description copied from class: NiftiPixelGenerator

Fills a byte buffer with pixels

Specified by:

getPixels in class NiftiPixelGenerator

i - column index

di - column step

ni - number of columns

j - row index

dj - row step

nj - number of rows

k - slice index

dk - slice step

nk - number of slices

t - time

scanline - number of bytes per line (y-stride)

pageline - number of bytes per page (z-stride)

rgb - output buffer

clone

public MappedPixelGenerator clone()

Description copied from interface: CompositeProperty

Returns a clone of this composite property.

Specified by:

clone in interface CompositeProperty

Specified by:

clone in interface Clonable

Overrides:

clone in class CompositePropertyBase

Returns:

clone of this property

getFormat

public NiftiPixelGenerator.Format getFormat()

Specified by:

getFormat in class NiftiPixelGenerator